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January 13, 2003
For Immediate Release
Sagres Lands Boehringer Ingelheim Deal as it Assembles
the ÔOncogenomeÕ
FUNCTIONAL genomics company Sagres Discovery, which
last week signed a multi-year collaboration with Boehringer
Ingelheim to identify oncology drug targets, exemplifies
a "newer wave" of bioinformatics methodology, according
to CEO and co-founder David Ferrick.
"WeÕve gone from a predictive to more of a deductive
type of bioinform-atics," said Ferrick of the Davis,
Calif.-based startup.
Sagres relies very heavily on bioinformatics as part
of its discovery process, Ferrick said, but has shifted
the traditional emphasis a bit. Using a high-throughput
retroviral approach, company scientists first experimentally
identify genes that are likely to cause tumors in vivo
in mice, deriving a subset of several thousand that
they have dubbed the "Oncogenome." The bioinformatics
comes in after this step, with all the advantages of
a smaller data set that has been functionally verified
experimentally.
"By doing this Oncogenome screen, instead of having
to look through the genome, which is where a lot of
peopleÕs starting point is, weÕre actually start-ing
at the point of where cancer is caused in vivo," Ferrick
said.
The Boehringer Ingelheim deal, the companyÕs first
pharmaceutical collabo-ration, is significant, Ferrick
added, because it will "prove that our starting point
in discovery is maybe better than how people have traditionally
been starting their discovery efforts."
Under the agreement, Boehringer Ingelheim will have
exclusive rights to certain targets to develop and market
antibody and small-molecule products world-wide, while
Sagres will retain rights to certain targets and will
also receive a "significant" up-front payment, additional
research funding, milestone payments, and royalty payments
from prod-uct sales. Financial details were not disclosed.
Kerstin Felix, a Boehringer Ingelheim spokeswoman,
declined to comment on the selection of Sagres as the
companyÕs research partner, noting only that the deal
is part of Boehringer IngelheimÕs oncology strategy.
NOVEL GENES, NEXT-GENERATION DATABASE
Sagres claims to have the largest single repository
of onco-genes in the industry, and is pursu-ing an aggressive
patenting stra-tegy to protect genes it has identified
through its unique com-bination of experimentation and
bioinformatics. Ferrick estimates that up to 30 percent
of the thou-sand or so genes it has found so far are
entirely novel.
The company has built a suite of software tools to
help it map cancer-causing mouse genes in the Celera
database to their orthologs in the human genome. While
mouse-human synteny maps are now appearing in the public
domain with the recent publication of the mouse genome,
Ferrick said that when Sagres began its work two years
ago, it had to develop all of its mouse-human mapping
programs from scratch.
Sagres is also building statistical and graphical tools
to help it analyze the various combinatorial possibilities
of mutations within cellular path-ways Ñ combinations
of co-muta-tions that are likely, or not likely, to
cause cancer. Public and in-house data are integrated
into a relational database that Sagres researchers can
query.
Although Sagres has identified drug discovery as its
primary goal, Ferrick hasnÕt ruled out the possibil-ity
of delving into the data-provider business in the future.
The company is currently developing a portal that will
initially allow its collaborators to access and view
the fully annotat-ed Oncogenome. Eventually, howev-er,
"We would hope to become the purveyor of a lot of that
information to the public as well."
Once Sagres has mined the information it needs from
its data-base, it hopes to become "the centralized clearing
house" for the information. Ferrick has no doubt that
thereÕs plenty of information in the resource for others
once Sagres has skimmed its share off the top: "We canÕt
exploit it all, not even close."
Sagres seems to have learned a valuable lesson from
Celera, which started life with the intention of selling
data, and later realized the limited revenue potential
of that model and turned to discovery as plan B. Ferrick
explained that Sagres plans to work out a fair balance
between its own discovery priorities and those of its
academic and commercial collaborators. "We want to hopefully
do a little better job than Celera did with the public
in terms of working out a consor-tium so that it can
get to investiga-tors without necessarily compro-mising
our ability to grow as a company," he said.
Ferrick noted that the company has the advantage of
following in CeleraÕs footsteps: "They went for the
structural genome first, while we went for the functional
cancer genome first. So obviously the structural genome
has limited value. It just tells you the playing field,
it doesnÕt tell you what any-oneÕs doing in that field."
He was quick to note, however, "if we didnÕt have Celera,
we couldnÕt do what we did. Because we have a genome
thatÕs struc-turally defined, it allows us to pinpoint
where the biology is occurring, so thatÕs a very impor-tant
component."
Yet despite his admiration for CeleraÕs contribution
to genomics, Ferrick took the opportunity to gloat a
bit. "TheyÕre going to regret the day they gave [the
genome data] to us or companies like us. WeÕre going
to derive way more value than theyÕre ever going to
see from it."
Sagres Discovery
Sagres is a discovery stage company dedicated to understanding
the molecular basis of cancer. Sagres DiscoveryÕs technology
platform combines the biology of cancer formation in
mouse models with the robustness of high-throughput
genomic technologies to enable discovery and clinical
validation of human cancer genes at unprecedented speed.
The Company is assembling the Oncogenomeª, one of the
most comprehensive sets of oncology targets in the world.
Of equal importance, the technology allows for the discrimination
between genes that cause disease and those that affect
or respond to disease processes. In addition to its
own internal drug discovery program, the Company is
building its initial product pipeline by selectively
using strategic partnerships and collaborations. Sagres
is located in Davis, California.
This
press release is made as a matter of record, and is
not intended, nor should be interpreted, as a recommendation
or solicitation to invest in any company or in any Axiom
entity.
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